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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs374037983 chr1:184057794 TACA/T 2.35E-6 482 15.47 17.58 25.93 KM Plot
THCA rs3740394 chr10:104634474 A/G 4.77E-9 489 15.2 17.78 32.1 KM Plot
THCA rs374450768 chr15:65873779 A/G 0.000224 467 15.97 15.17 18.9 KM Plot
THCA rs374458999 chr4:88209564 GA/G 6.12E-7 481 16.25 15.33 11.33 KM Plot
THCA rs3745705 chr19:49342269 T/C 4.55E-7 475 16.02 16.8 15.93 KM Plot
THCA rs3746207 chr19:58233008 C/T 0.000138 490 15.17 17.23 15.13 KM Plot
THCA rs374776274 chr10:81848523 CAA/C 0.000147 487 15.93 16.07 9.77 KM Plot
THCA rs3747771 chr6:24425671 A/G 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs3747772 chr6:24425609 T/A 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs3748643 chr1:45965703 G/T 4.82E-5 490 10.6 16.07 16.97 KM Plot
THCA rs3754497 chr1:22378670 G/A 4.95E-8 487 15.32 17.73 9.47 KM Plot
THCA rs3754500 chr1:22377718 G/A 4.14E-8 489 15.3 17.68 9.47 KM Plot
THCA rs3754501 chr1:22377543 T/A 4.18E-8 489 15.23 17.73 9.47 KM Plot
THCA rs3754505 chr1:22351326 G/C 3.25E-5 471 14.7 17.72 12.4 KM Plot
THCA rs3755883 chr4:3223250 A/G 9.3E-6 476 16.8 14.23 15.2 KM Plot